rfmm_124126.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_124126.1
Species:mouse
Chr:chr13
Start:54346126
End:54346170
Strand:+
Source datasetsFANTOM5|EPD|DRA000914
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2439714,EM10E1007369)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000038101.4:0
AK020259:0
AK163760:0
GeneID:15466
HGNC/MGI_ID:MGI:108482
UniProt_ID:P97292
Nearer transcript ids and distances:
    Gene_name:histamine receptor H2
    Gene_symbol:Hrh2
    Gene_synonyms:H2r
    Gene_source:MGI:108482



    TATA-Box annotation


    Distance to TSS:0
    Nearest PromoterID:NM_001010973.2
    Entrez ID:Hrh2
    Nearest Unigene:XM_036157857
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:histamine receptor H2
    Gene Alias:
    Gene Type:
    CpG%:0.068182
    GC%:0.688889
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.