rfmm_124178.1

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Basic information about the TSS


TSS ID:rfmm_124178.1
Species:mouse
Chr:chr13
Start:54737740
End:54737765
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF199543:254
MA435120:254
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000026986.7:255
  • NM_025933.3:279
  • AK005269:279
  • AK008387:284
  • BC021471:293
  • AK004272:439
  • LF236614:461
  • MA472191:461
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:135
Nearest PromoterID:NM_178605.4
Entrez ID:Nop16
Nearest Unigene:NM_178605
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.080000
GC%:0.576923
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):