rfmm_124669.1

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Basic information about the TSS


TSS ID:rfmm_124669.1
Species:mouse
Chr:chr13
Start:58974826
End:58974828
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2441914,EM10E1008317)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000225867.2:18
GeneID:
HGNC/MGI_ID:MGI:6096364
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 47423
    Gene_symbol:Gm47423
    Gene_synonyms:
    Gene_source:MGI:6096364



    TATA-Box annotation


    Distance to TSS:19316
    Nearest PromoterID:NM_001025074.2
    Entrez ID:Ntrk2
    Nearest Unigene:NM_001025074
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 47423
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.333333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.