rfmm_126599.1

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Basic information about the TSS


TSS ID:rfmm_126599.1
Species:mouse
Chr:chr13
Start:100923018
End:100923018
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2452613,EM10E1012294)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:S43105:6
GeneID:268697
HGNC/MGI_ID:MGI:88302
UniProt_ID:
Nearer transcript ids and distances:
  • AK136259:11
  • AK168502:11
  • AK166686:11
  • AK167950:11
  • AK168441:11
  • AK168993:14
  • AK163259:14
  • X58708:19
  • ENSMUST00000091295.14:24
  • NM_172301.3:24
  • BC011478:24
  • BC085238:28
  • ENSMUST00000142056.2:35
  • X64713:47
  • BC080202:54
  • ENSMUST00000072119.15:-60
  • LF199697:-61
  • MA435274:-61
  • AK143597:69
  • ENSMUST00000174038.2:108
  • FJ931532:108
  • LF237935:240
  • MA473512:240
  • LF237934:446
  • MA473511:446
view more...
Gene_name:cyclin B1
Gene_symbol:Ccnb1
Gene_synonyms:Ccnb1-rs13 Cycb-4
Gene_source:MGI:88302



TATA-Box annotation


Distance to TSS:-24
Nearest PromoterID:NM_172301.3
Entrez ID:Ccnb1
Nearest Unigene:NM_172301
Nearest Refseq:
Nearest Ensembl:
Gene Name:cyclin B1
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "AK136259:11 AK168502:11 AK166686:11 AK167950:11 AK168441:11 AK168993:14 AK163259:14 X58708:19 ENSMUST00000091295.14:24 NM_172301.3:24 BC011478:24 BC085238:28 ENSMUST00000142056.2:35 X64713:47 BC080202:54 ENSMUST00000072119.15:-60 LF199697:-61 MA435274:-61 AK143597:69 ENSMUST00000174038.2:108 FJ931532:108 LF237935:240 MA473512:240 LF237934:446 MA473511:446" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.