rfmm_126600.1

Basic information about the TSS

TSS ID:	rfmm_126600.1
TSS ID(Version3):	mm_118018.1
Species:	mouse
Chr:	chr13

Start:	100923040
End:	100923064
Strand:	-

Source datasets

FANTOM5|PRJDB10397|GSE117655|DRA000914

Protocol

CAGE|C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2452613,EM10E1012294)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000072119.15:-14
GeneID:	268697
HGNC/MGI_ID:	MGI:88302
UniProt_ID:	Q3TQW9
Nearer transcript ids and distances:	LF199697:-15 MA435274:-15 S43105:28 AK136259:33 AK168502:33 AK166686:33 AK167950:33 AK168441:33 AK168993:36 AK163259:36 X58708:41 ENSMUST00000091295.14:46 NM_172301.3:46 BC011478:46 BC085238:50 ENSMUST00000142056.2:57 X64713:69 BC080202:76 AK143597:91 ENSMUST00000174038.2:130 FJ931532:130 LF237935:262 MA473512:262 LF237934:468 MA473511:468 view more...

Gene_name:	cyclin B1
Gene_symbol:	Ccnb1
Gene_synonyms:	Ccnb1-rs13 Cycb-4
Gene_source:	MGI:88302

TATA-Box annotation

Distance to TSS:	-58
Nearest PromoterID:	NM_172301.3
Entrez ID:	Ccnb1
Nearest Unigene:	NM_172301
Nearest Refseq:
Nearest Ensembl:
Gene Name:	cyclin B1
Gene Alias:
Gene Type:
CpG%:	0.125000
GC%:	0.720000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "LF199697:-15 MA435274:-15 S43105:28 AK136259:33 AK168502:33 AK166686:33 AK167950:33 AK168441:33 AK168993:36 AK163259:36 X58708:41 ENSMUST00000091295.14:46 NM_172301.3:46 BC011478:46 BC085238:50 ENSMUST00000142056.2:57 X64713:69 BC080202:76 AK143597:91 ENSMUST00000174038.2:130 FJ931532:130 LF237935:262 MA473512:262 LF237934:468 MA473511:468" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.