rfmm_127464.1

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Basic information about the TSS


TSS ID:rfmm_127464.1
Species:mouse
Chr:chr13
Start:119624617
End:119624629
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1392024,EM10E0573830)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001039244.4:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC021422:-13
  • ENSMUST00000176171.9:-42
  • ENSMUST00000223912.2:-42
  • ENSMUST00000177361.3:-42
  • AK050607:-42
  • AK162713:-42
  • NM_001177666.2:380
  • NM_001370626.1:380
  • NM_001370627.1:380
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001039244.4
Entrez ID:Tmem267
Nearest Unigene:NM_001039244
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.083333
GC%:0.615385
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):