rfmm_12859.1

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Basic information about the TSS


TSS ID:rfmm_12859.1
Species:mouse
Chr:chr2
Start:26823641
End:26823649
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2629214,EM10E1084548)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF259345:-18
MA494922:-18
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000153771.8:410
  • NM_001379464.1:419
  • NM_001379463.1:419
  • NM_198628.3:419
  • ENSMUST00000055406.9:432
  • BC050806:432
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:112
Nearest PromoterID:XM_006498110.4
Entrez ID:Stkld1
Nearest Unigene:XM_006498110
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):