rfmm_129187.1

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Basic information about the TSS


TSS ID:rfmm_129187.1
Species:mouse
Chr:chr14
Start:32187751
End:32187751
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2465830,EM10E1017407)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK046406:-115
GeneID:12647
HGNC/MGI_ID:MGI:88392
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000070125.6:-163
  • ENSMUST00000226351.2:-163
  • ENSMUST00000228511.2:-163
  • D12491:-163
  • D12492:-163
  • D12493:-163
  • ENSMUST00000226365.2:-195
  • D12490:-195
view more...
Gene_name:choline acetyltransferase
Gene_symbol:Chat
Gene_synonyms:B230380D24Rik
Gene_source:MGI:88392



TATA-Box annotation


Distance to TSS:115
Nearest PromoterID:NM_009891.2
Entrez ID:Chat
Nearest Unigene:NM_009891
Nearest Refseq:
Nearest Ensembl:
Gene Name:choline acetyltransferase
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.