rfmm_12933.1

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Basic information about the TSS


TSS ID:rfmm_12933.1
Species:mouse
Chr:chr2
Start:27332470
End:27332582
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1676779,EM10E0689216)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000209262.2:0
AK081278:0
GeneID:100504116
HGNC/MGI_ID:MGI:106557
UniProt_ID:
Nearer transcript ids and distances:
  • NM_001360791.1:-22
  • NM_001360792.1:-22
  • NM_001360790.1:-22
  • AK038857:49
  • LF259355:98
  • MA494932:98
  • ENSMUST00000209765.2:-134
  • LF193209:-135
  • MA428786:-135
  • LF193208:-137
  • MA428785:-137
  • BC094334:290
view more...
Gene_name:bromodomain containing 3, opposite strand
Gene_symbol:Brd3os
Gene_synonyms:D2Bwg1423e Gm20071
Gene_source:MGI:106557



TATA-Box annotation


Distance to TSS:78
Nearest PromoterID:NM_001360791.1
Entrez ID:Brd3os
Nearest Unigene:NM_001360791
Nearest Refseq:
Nearest Ensembl:
Gene Name:bromodomain containing 3, opposite strand
Gene Alias:
Gene Type:
CpG%:0.125000
GC%:0.725664
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.