rfmm_130903.1

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Basic information about the TSS


TSS ID:rfmm_130903.1
Species:mouse
Chr:chr14
Start:55728520
End:55728593
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2471312,EM10E1019671)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000226757.2:0
ENSMUST00000076236.7:0
AK148355:0
AK131164:0
GeneID:268747
HGNC/MGI_ID:MGI:2448573
UniProt_ID:A0A2I3BRA2 Q3UFQ8
Nearer transcript ids and distances:
  • ENSMUST00000227563.2:30
  • BC092223:30
  • ENSMUST00000227312.2:37
  • BC082805:37
  • BC156310:106
  • BC157091:106
  • ENSMUST00000228877.2:-412
  • NR_155103.1:-412
  • AK158466:-412
view more...
Gene_name:capping protein regulator and myosin 1 linker 3
Gene_symbol:Carmil3
Gene_synonyms:Lrrc16b
Gene_source:MGI:2448573



TATA-Box annotation


Distance to TSS:29
Nearest PromoterID:NM_001024645.2
Entrez ID:Carmil3
Nearest Unigene:XM_006519050
Nearest Refseq:
Nearest Ensembl:
Gene Name:capping protein regulator and myosin 1 linker 3
Gene Alias:
Gene Type:
CpG%:0.150685
GC%:0.810811
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.