rfmm_131198.1

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Basic information about the TSS


TSS ID:rfmm_131198.1
Species:mouse
Chr:chr14
Start:57983502
End:57983601
Strand:-
Source datasetsGSE117655|DRA000914
ProtocoldeepCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2472120,EM10E1020039)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000174694.8:0
ENSMUST00000022531.14:0
ENSMUST00000174213.8:0
ENSMUST00000173990.8:0
AK029242:0
BC053028:0
AK164789:0
AK029870:0
AK081190:0
AK029966:0
AK163607:0
BC024819:0
KY442318:0
GeneID:50523
HGNC/MGI_ID:MGI:1354386 MGI:6121571
UniProt_ID:G3UXG3 G3UY78 G3UZ29 Q7TSJ6
Nearer transcript ids and distances:
  • ENSMUST00000173077.2:-434
Gene_name:large tumor suppressor 2; predicted gene, 49361
Gene_symbol:Gm49361 Lats2
Gene_synonyms:
Gene_source:MGI:1354386 MGI:6121571



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:XM_006519225.4
Entrez ID:Lats2
Nearest Unigene:NM_153382
Nearest Refseq:
Nearest Ensembl:
Gene Name:large tumor suppressor 2; predicted gene, 49361
Gene Alias:
Gene Type:
CpG%:0.131313
GC%:0.660000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.