rfmm_133183.1

Basic information about the TSS

TSS ID:	rfmm_133183.1
Species:	mouse
Chr:	chr14

Start:	80008746
End:	80008758
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D1429600,EM10E0589099)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000039568.11:0 ENSMUST00000195355.2:0 ENSMUST00000195034.2:0 AK049982:0 AK048638:0
GeneID:	18530
HGNC/MGI_ID:	MGI:1306800
UniProt_ID:	Q7TSK3
Nearer transcript ids and distances:	BC053008:6 BC052388:13 AF231125:73 ENSMUST00000194214.2:102 AK140407:109 LF203221:-481 MA438798:-481 view more...

Gene_name:	protocadherin 8
Gene_symbol:	Pcdh8
Gene_synonyms:	1700080P15Rik Papc
Gene_source:	MGI:1306800

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_001042726.3
Entrez ID:	Pcdh8
Nearest Unigene:	NM_021543
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin 8
Gene Alias:
Gene Type:
CpG%:	0.083333
GC%:	0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.