rfmm_134227.1

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Basic information about the TSS


TSS ID:rfmm_134227.1
Species:mouse
Chr:chr14
Start:122712615
End:122712631
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2487370,EM10E1025387)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF200150:3
MA435727:3
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000177306.2:4
  • NR_045046.1:4
  • AK011684:4
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-12
Nearest PromoterID:NR_045046.1
Entrez ID:2610035F20Rik
Nearest Unigene:NR_045046
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.125000
GC%:0.588235
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):