rfmm_134429.1

Basic information about the TSS

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TSS ID: rfmm_134429.1 Species: mouse Chr: chr15		Start: 5173344 End: 5173378 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2488265,EM10E1025708)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000228218.2:0 AK160612:0 AK147811:0 BC086695:0 GeneID: 105787 HGNC/MGI_ID: MGI:2145955 UniProt_ID: Q3TUQ7 Nearer transcript ids and distances: ENSMUST00000051186.9:-1 NM_001355640.1:-1 NM_001013367.3:-1 LF200161:-2 MA435738:-2 AY885266:8 LF242845:63 MA478422:63 LF242846:245 MA478423:245 view more...

Gene_name: protein kinase, AMP-activated, alpha 1 catalytic subunit Gene_symbol: Prkaa1 Gene_synonyms: AMPKalpha1 C130083N04Rik Gene_source: MGI:2145955

TATA-Box annotation

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Distance to TSS:	18
Nearest PromoterID:	NM_001355640.1
Entrez ID:	Prkaa1
Nearest Unigene:	XM_036159053
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protein kinase, AMP-activated, alpha 1 catalytic subunit
Gene Alias:
Gene Type:
CpG%:	0.088235
GC%:	0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.