rfmm_134563.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_134563.1
TSS ID(Version3):mm_124768.1
Species:mouse
Chr:chr15
Start:6737822
End:6737913
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2488732,EM10E1025901)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000228918.2:0
ENSMUST00000226201.2:0
ENSMUST00000226181.2:0
ENSMUST00000228266.2:0
ENSMUST00000061656.8:0
AK036492:0
AK029196:0
AK087858:0
AK036149:0
AK082586:0
BC120903:0
BC120904:0
AY540053:0
AK019537:0
AK054119:0
AY497009:0
GeneID:78757
HGNC/MGI_ID:MGI:1926007
UniProt_ID:Q0VAV3 Q6QI06 Q8C2V9 Q8CB99
Nearer transcript ids and distances:
    Gene_name:RPTOR independent companion of MTOR, complex 2
    Gene_symbol:Rictor
    Gene_synonyms:4921505C17Rik 6030405M08Rik D530039E11Rik
    Gene_source:MGI:1926007



    TATA-Box annotation


    Distance to TSS:5
    Nearest PromoterID:NM_030168.3
    Entrez ID:Rictor
    Nearest Unigene:XM_006520003
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RPTOR independent companion of MTOR, complex 2
    Gene Alias:
    Gene Type:
    CpG%:0.142857
    GC%:0.663043
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.