rfmm_136302.1

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Basic information about the TSS


TSS ID:rfmm_136302.1
TSS ID(Version3):mm_125563.1
mm_169661.1
Species:mouse
Chr:chr15
Start:58805623
End:58805685
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1466244,EM10E0599934)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000228595.2:0
AK003540:0
AK002254:0
AK004522:0
BC031539:0
GeneID:66218
HGNC/MGI_ID:MGI:1913468
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000022980.5:-18
Gene_name:NADH:ubiquinone oxidoreductase subunit B9
Gene_symbol:Ndufb9
Gene_synonyms:1190008J14Rik
Gene_source:MGI:1913468



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_023172.4
Entrez ID:Ndufb9
Nearest Unigene:NM_001364808
Nearest Refseq:
Nearest Ensembl:
Gene Name:NADH:ubiquinone oxidoreductase subunit B9
Gene Alias:
Gene Type:
CpG%:0.161290
GC%:0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.