rfmm_137242.1

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Basic information about the TSS


TSS ID:rfmm_137242.1
Species:mouse
Chr:chr15
Start:75963504
End:75963520
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2505742,EM10E1031784)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001358359.1:-19
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000228366.3:28
  • ENSMUST00000226444.2:29
  • AK158425:29
  • ENSMUST00000227605.2:150
  • BC068117:150
  • ENSMUST00000228419.2:277
  • LF244938:494
  • MA480515:494
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_001358359.1
Entrez ID:Nrbp2
Nearest Unigene:NM_001358359
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.125000
GC%:0.823529
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):