rfmm_138135.1

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Basic information about the TSS


TSS ID:rfmm_138135.1
Species:mouse
Chr:chr15
Start:79543398
End:79543468
Strand:+
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2507985,EM10E1033168)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000023064.9:0
AF331040:0
AK003719:0
GeneID:73739
HGNC/MGI_ID:MGI:1920989
UniProt_ID:Q9D1C2
Nearer transcript ids and distances:
    Gene_name:chibby family member 1, beta catenin antagonist
    Gene_symbol:Cby1
    Gene_synonyms:1110014P06Rik PGEA14 Pgea1 arb1
    Gene_source:MGI:1920989



    TATA-Box annotation


    Distance to TSS:5
    Nearest PromoterID:NM_028634.3
    Entrez ID:Cby1
    Nearest Unigene:NM_028634
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:chibby family member 1, beta catenin antagonist
    Gene Alias:
    Gene Type:
    CpG%:0.142857
    GC%:0.704225
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.