rfmm_138947.1

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Basic information about the TSS


TSS ID:rfmm_138947.1
Species:mouse
Chr:chr15
Start:85040328
End:85040338
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2511163,EM10E1034874)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000229478.2:0
AK085771:0
GeneID:100502602
HGNC/MGI_ID:MGI:5011462
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 19277
    Gene_symbol:Gm19277
    Gene_synonyms:
    Gene_source:MGI:5011462



    TATA-Box annotation


    Distance to TSS:0
    Nearest PromoterID:NR_040360.1
    Entrez ID:Gm19277
    Nearest Unigene:NR_040360
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 19277
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.545455
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.