rfmm_141274.1

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Basic information about the TSS


TSS ID:rfmm_141274.1
TSS ID(Version3):mm_131039.1
mm_131038.1
mm_131040.1
Species:mouse
Chr:chr16
Start:3702494
End:3702573
Strand:+
Source datasetsFANTOM5|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2519473,EM10E1038850)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000176233.2:0
ENSMUST00000176625.8:0
ENSMUST00000135093.8:0
ENSMUST00000143537.9:0
ENSMUST00000186375.8:0
ENSMUST00000147949.8:0
AK039910:0
BC004837:0
AK088736:0
GeneID:74763
HGNC/MGI_ID:MGI:1922013 MGI:5313142
UniProt_ID:D6RDS3 H3BIY0 H3BJZ6 H3BLK7 Q9DBU2
Nearer transcript ids and distances:
  • ENSMUST00000140832.2:4
  • NM_001290689.1:-11
  • NM_029090.3:-11
  • DQ542674:42
  • ENSMUST00000115860.8:60
  • AK004750:60
view more...
Gene_name:N(alpha)-acetyltransferase 60, NatF catalytic subunit; predicted gene 20695
Gene_symbol:Gm20695 Naa60
Gene_synonyms:1200013P24Rik Nat15
Gene_source:MGI:1922013 MGI:5313142



TATA-Box annotation


Distance to TSS:34
Nearest PromoterID:XM_006522679.3
Entrez ID:Naa60
Nearest Unigene:XM_017317155
Nearest Refseq:
Nearest Ensembl:
Gene Name:N(alpha)-acetyltransferase 60, NatF catalytic subunit; predicted gene 20695
Gene Alias:
Gene Type:
CpG%:0.101266
GC%:0.712500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.