rfmm_141576.1

Basic information about the TSS

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TSS ID: rfmm_141576.1 Species: mouse Chr: chr16		Start: 8331337 End: 8331361 Strand: +
Source datasets	FANTOM5|EPD|DRA000914
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2520917,EM10E1039338)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000115838.8:0 ENSMUST00000140795.2:0 ENSMUST00000115839.9:0 AK165348:0 AK132282:0 AK160802:0 AK083062:0 AK036128:0 BC058079:0 BC058521:0 GeneID: 268860 HGNC/MGI_ID: MGI:2443582 UniProt_ID: P61922 Q3TUE8 Q3V1S0 Nearer transcript ids and distances: ENSMUST00000065987.14:-44 NM_001170978.1:-44 NM_172961.3:-44 view more...

Gene_name: 4-aminobutyrate aminotransferase Gene_symbol: Abat Gene_synonyms: 9630038C02Rik GABA-T Gene_source: MGI:2443582

TATA-Box annotation

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Distance to TSS:	56
Nearest PromoterID:	NM_001170978.1
Entrez ID:	Abat
Nearest Unigene:	NM_172961
Nearest Refseq:
Nearest Ensembl:
Gene Name:	4-aminobutyrate aminotransferase
Gene Alias:
Gene Type:
CpG%:	0.125000
GC%:	0.760000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.