rfmm_143474.1

Basic information about the TSS

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TSS ID: rfmm_143474.1 TSS ID(Version3): mm_134926.1 Species: mouse Chr: chr16		Start: 30406347 End: 30406416 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D1510641,EM10E0620452)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000117363.9:0 ENSMUST00000143170.9:0 ENSMUST00000150499.9:0 ENSMUST00000144666.8:0 ENSMUST00000128561.8:0 ENSMUST00000129004.2:0 AK135345:0 BC043724:0 AK145186:0 AK078501:0 AK146895:0 AK030940:0 AK132527:0 GeneID: 224092 HGNC/MGI_ID: MGI:107236 UniProt_ID: Q3UM18 Nearer transcript ids and distances: AK197719:65 AK219624:65 view more...

Gene_name: large 60S subunit nuclear export GTPase 1 Gene_symbol: Lsg1 Gene_synonyms: D16Bwg1547e Gene_source: MGI:107236

TATA-Box annotation

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Distance to TSS:	26
Nearest PromoterID:	NM_178069.5
Entrez ID:	Lsg1
Nearest Unigene:	NM_178069
Nearest Refseq:
Nearest Ensembl:
Gene Name:	large 60S subunit nuclear export GTPase 1
Gene Alias:
Gene Type:
CpG%:	0.086957
GC%:	0.585714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.