rfmm_144678.1

Basic information about the TSS

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TSS ID: rfmm_144678.1 Species: mouse Chr: chr16		Start: 44167760 End: 44167842 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS,CTCF-bound (EM10D2533665,EM10E1044851)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000155661.8:0 AK165031:0 BC052381:0 BC056960:0 AK048789:0 GeneID: 212514 HGNC/MGI_ID: MGI:1196252 UniProt_ID: Q3TNS9 Nearer transcript ids and distances: LF248464:-230 MA484041:-230 ENSMUST00000050897.7:-276 AY099108:-276 LF200748:-277 MA436325:-277 view more...

Gene_name: spindle and centriole associated protein 1 Gene_symbol: Spice1 Gene_synonyms: Ccdc52 D16Ertd480e Gene_source: MGI:1196252

TATA-Box annotation

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Distance to TSS:	37
Nearest PromoterID:	NM_144550.4
Entrez ID:	Spice1
Nearest Unigene:	XR_004939177
Nearest Refseq:
Nearest Ensembl:
Gene Name:	spindle and centriole associated protein 1
Gene Alias:
Gene Type:
CpG%:	0.085366
GC%:	0.638554
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.