rfmm_147484.1

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Basic information about the TSS


TSS ID:rfmm_147484.1
Species:mouse
Chr:chr17
Start:8164677
End:8164723
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2546844,EM10E1049564)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENSMUST00000160545.2 AK083703 AK088742
Distance:0
GeneID:100040822
HGNC/MGI_ID:MGI:2445079 MGI:3807545
UniProt_ID:
Gene_name:Rsph3a
Gene_symbol:E430024P14Rik Gm1604a
Gene_synonyms:
Gene_source:MGI:2445079 MGI:3807545



TATA-Box annotation


Distance to TSS:254
Nearest PromoterID:NM_025789.5
Entrez ID:Rsph3a
Nearest Unigene:NM_025789
Nearest Refseq:
Nearest Ensembl:
Gene Name:Rsph3a
Gene Alias:
Gene Description:
Gene Type:
CpG%:0.108696
GC%:0.723404
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.