rfmm_1475.1

Basic information about the TSS

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TSS ID: rfmm_1475.1 Species: mouse Chr: chr1		Start: 42734109 End: 42734142 Strand: +
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2270009,EM10E0934977)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000239323.2:-24 ENSMUST00000199521.5:-24 ENSMUST00000176807.3:-24 GeneID: 108167623 18993 HGNC/MGI_ID: MGI:102564 MGI:5313093 UniProt_ID: P31361 Nearer transcript ids and distances: NR_168294.1:-41 NR_168292.1:-41 view more...

Gene_name: POU domain, class 3, transcription factor 3; predicted gene 20646 Gene_symbol: Gm20646 Pou3f3 Gene_synonyms: Brn-1 Brn1 Gm46091 HST011 Otf8 urehr2 Gene_source: MGI:102564 MGI:5313093

TATA-Box annotation

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Distance to TSS:	57
Nearest PromoterID:	NR_168292.1
Entrez ID:	Gm46091
Nearest Unigene:	NR_168294
Nearest Refseq:
Nearest Ensembl:
Gene Name:	POU domain, class 3, transcription factor 3; predicted gene 20646
Gene Alias:
Gene Type:
CpG%:	0.060606
GC%:	0.617647
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.