rfmm_147597.1

Basic information about the TSS

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TSS ID: rfmm_147597.1 TSS ID(Version3): mm_140598.1 mm_140602.1 mm_140601.1 mm_140600.1 mm_140599.1 Species: mouse Chr: chr17		Start: 10538165 End: 10538309 Strand: -
Source datasets	FANTOM5|GSE117655|DRA000914|PRJDB10397
Protocol	CAGE|deepCAGE|CAGE_and_CAGEscan|C1CAGE
TSS cluster detected*	4

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2547652,EM10E1049844)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000233645.2:0 ENSMUST00000042296.9:0 ENSMUST00000233828.2:0 U44940:0 AK132303:0 GeneID: 19317 HGNC/MGI_ID: MGI:97837 UniProt_ID: Q9QYS9 Nearer transcript ids and distances: BC053426:6 BC056346:349 LF249809:349 MA485386:349 ENSMUST00000097414.11:-474 AF090402:-474 AF090403:-474 AF090404:-474 AF091047:-474 view more...

Gene_name: quaking, KH domain containing RNA binding Gene_symbol: Qki Gene_synonyms: 1110003F05Rik Qk QkI l(17)-1Wis l17Wis1 Gene_source: MGI:97837

TATA-Box annotation

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Distance to TSS:	53
Nearest PromoterID:	NM_021881.2
Entrez ID:	Qk
Nearest Unigene:	NM_001159517
Nearest Refseq:
Nearest Ensembl:
Gene Name:	quaking, KH domain containing RNA binding
Gene Alias:
Gene Type:
CpG%:	0.166667
GC%:	0.744828
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.