rfmm_147601.1

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Basic information about the TSS


TSS ID:rfmm_147601.1
Species:mouse
Chr:chr17
Start:10538824
End:10538861
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2547653,EM10E1049845)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK012373:0
AK046926:0
GeneID:100526796
HGNC/MGI_ID:MGI:4462384
UniProt_ID:
Nearer transcript ids and distances:
  • LF249811:461
  • MA485388:461
view more...
Gene_name:colon adenocarcinoma hypermethylated RNA
Gene_symbol:Cahm
Gene_synonyms:B930003M22Rik
Gene_source:MGI:4462384



TATA-Box annotation


Distance to TSS:-6
Nearest PromoterID:NR_037588.1
Entrez ID:Cahm
Nearest Unigene:NR_037588
Nearest Refseq:
Nearest Ensembl:
Gene Name:colon adenocarcinoma hypermethylated RNA
Gene Alias:
Gene Type:
CpG%:0.135135
GC%:0.815789
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.