rfmm_147844.1

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Basic information about the TSS


TSS ID:rfmm_147844.1
Species:mouse
Chr:chr17
Start:13980667
End:13980688
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2548969,EM10E1050366)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK044118:30
GeneID:102636844
HGNC/MGI_ID:MGI:3802073
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000155166.2:37
  • ENSMUST00000232858.2:321
  • ENSMUST00000129681.3:420
view more...
Gene_name:predicted gene 16049
Gene_symbol:Gm16049
Gene_synonyms:
Gene_source:MGI:3802073



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:XM_030249642.2
Entrez ID:Tcte2
Nearest Unigene:NM_022311
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene 16049
Gene Alias:
Gene Type:
CpG%:0.190476
GC%:0.818182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.