rfmm_148508.1

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Basic information about the TSS


TSS ID:rfmm_148508.1
Species:mouse
Chr:chr17
Start:24673831
End:24673855
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2550957,EM10E1051166)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK163105:0
AK133687:0
BC026600:0
GeneID:414070
HGNC/MGI_ID:MGI:3041248
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:cDNA sequence BC026600
    Gene_symbol:BC026600
    Gene_synonyms:
    Gene_source:MGI:3041248



    TATA-Box annotation


    Distance to TSS:514
    Nearest PromoterID:XM_036160296.1
    Entrez ID:E4f1
    Nearest Unigene:NM_007893
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:cDNA sequence BC026600
    Gene Alias:
    Gene Type:
    CpG%:0.041667
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.