rfmm_148730.1

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Basic information about the TSS


TSS ID:rfmm_148730.1
Species:mouse
Chr:chr17
Start:25493338
End:25493370
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2551461,EM10E1051459)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK143641:-240
GeneID:100272221
HGNC/MGI_ID:MGI:5009987
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 17801
    Gene_symbol:Gm17801
    Gene_synonyms:
    Gene_source:MGI:5009987



    TATA-Box annotation


    Distance to TSS:-70
    Nearest PromoterID:NM_011665.4
    Entrez ID:Ube2i
    Nearest Unigene:XM_036160485
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 17801
    Gene Alias:
    Gene Type:
    CpG%:0.062500
    GC%:0.666667
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.