rfmm_149568.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_149568.1
Species:mouse
Chr:chr17
Start:29768563
End:29768572
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2554366,EM10E1053253)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000114683.10:0
ENSMUST00000234620.2:0
AK016810:0
GeneID:71138
HGNC/MGI_ID:MGI:3646280
UniProt_ID:A0A3Q4L2R6 Q14AF1
Nearer transcript ids and distances:
  • ENSMUST00000168339.3:32
  • BC116865:32
  • BC116867:32
  • BC144829:32
  • ENSMUST00000234305.2:-40
  • ENSMUST00000234648.2:-55
  • ENSMUST00000234176.2:-64
  • ENSMUST00000234979.2:-73
view more...
Gene_name:transmembrane protein 217
Gene_symbol:Tmem217
Gene_synonyms:4933413N12Rik EG622644
Gene_source:MGI:3646280



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001162901.1
Entrez ID:Tmem217
Nearest Unigene:NM_001162901
Nearest Refseq:
Nearest Ensembl:
Gene Name:transmembrane protein 217
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.