rfmm_150632.1

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Basic information about the TSS


TSS ID:rfmm_150632.1
Species:mouse
Chr:chr17
Start:35100981
End:35101056
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2557131,EM10E1054617)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000146299.8:0
ENSMUST00000152417.8:0
M57891:0
BC011086:0
AK216863:0
GeneID:12263
HGNC/MGI_ID:MGI:5142012 MGI:88226
UniProt_ID:B8JJN0 B8JJN2
Nearer transcript ids and distances:
  • ENSMUST00000025230.15:-20
  • NM_013484.2:-20
  • AK146812:-20
  • ENSMUST00000130728.2:38
view more...
Gene_name:complement component 2 (within H-2S); predicted gene 20547
Gene_symbol:C2 Gm20547
Gene_synonyms:classical-complement_pathway_C3/C5_convertase
Gene_source:MGI:5142012 MGI:88226



TATA-Box annotation


Distance to TSS:58
Nearest PromoterID:NM_013484.2
Entrez ID:C2
Nearest Unigene:NM_013484
Nearest Refseq:
Nearest Ensembl:
Gene Name:complement component 2 (within H-2S); predicted gene 20547
Gene Alias:
Gene Type:
CpG%:0.080000
GC%:0.552632
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.