rfmm_151019.1

Basic information about the TSS

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TSS ID: rfmm_151019.1 Species: mouse Chr: chr17		Start: 35643847 End: 35643861 Strand: +
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D1559688,EM10E0640680)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000113879.4:0 GeneID: 110557 HGNC/MGI_ID: MGI:95935 UniProt_ID: P79568 Nearer transcript ids and distances: ENSMUST00000174699.8:-21 NM_001368742.1:-21 NM_207648.2:-21 NM_001368741.1:-21 view more...

Gene_name: histocompatibility 2, Q region locus 6 Gene_symbol: H2-Q6 Gene_synonyms: 0610037M15Rik H-2Q6 Qa-6 Qa6 Gene_source: MGI:95935

TATA-Box annotation

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Distance to TSS:	28
Nearest PromoterID:	NM_001368742.1
Entrez ID:	H2-Q6
Nearest Unigene:	NM_001368742
Nearest Refseq:
Nearest Ensembl:
Gene Name:	histocompatibility 2, Q region locus 6
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.533333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.