rfmm_151900.1

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Basic information about the TSS


TSS ID:rfmm_151900.1
Species:mouse
Chr:chr17
Start:40158589
End:40158589
Strand:+
Source datasetsGSE117655
ProtocoldeepCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AY194859:-27
GeneID:387239
HGNC/MGI_ID:MGI:2676865
UniProt_ID:
Nearer transcript ids and distances:
  • AB350881:39
  • AB352917:39
  • AB352347:-119
  • DQ540853:361
  • BC042411:-407
  • K01380:437
  • M55272:453
  • DQ541851:477
  • DQ541113:-483
  • AB351077:488
  • DQ553409:-495
view more...
Gene_name:microRNA 199b
Gene_symbol:Mir199b
Gene_synonyms:Mirn199b mmu-mir-199b
Gene_source:MGI:2676865



TATA-Box annotation


Distance to TSS:1344
Nearest PromoterID:Rn18s-rs5
Entrez ID:Rn18s-rs5
Nearest Unigene:Rn18s-rs5
Nearest Refseq:
Nearest Ensembl:
Gene Name:microRNA 199b
Gene Alias:
Gene Type:NA
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.