rfmm_152060.1

Basic information about the TSS

TSS ID:	rfmm_152060.1
Species:	mouse
Chr:	chr17

Start:	42627555
End:	42627574
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2558681,EM10E1055374)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000232968.2:-64 BC151166:-64
GeneID:	627626
HGNC/MGI_ID:	MGI:1920485
UniProt_ID:	B9EKX1
Nearer transcript ids and distances:

Gene_name:	patched domain containing 4
Gene_symbol:	Ptchd4
Gene_synonyms:	3110082D06Rik
Gene_source:	MGI:1920485

TATA-Box annotation

Distance to TSS:	73
Nearest PromoterID:	NM_001355270.1
Entrez ID:	Ptchd4
Nearest Unigene:	XM_036160723
Nearest Refseq:
Nearest Ensembl:
Gene Name:	patched domain containing 4
Gene Alias:
Gene Type:
CpG%:	0.105263
GC%:	0.650000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.