rfmm_152218.1

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Basic information about the TSS


TSS ID:rfmm_152218.1
Species:mouse
Chr:chr17
Start:44416802
End:44416824
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2559178,EM10E1055580)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK033935:0
GeneID:102638326
HGNC/MGI_ID:MGI:5594076
UniProt_ID:
Nearer transcript ids and distances:
  • NR_167720.1:-127
Gene_name:predicted gene, 34917
Gene_symbol:Gm34917
Gene_synonyms:
Gene_source:MGI:5594076



TATA-Box annotation


Distance to TSS:-88
Nearest PromoterID:XM_036160551.1
Entrez ID:Enpp4
Nearest Unigene:NM_001357997
Nearest Refseq:
Nearest Ensembl:
Gene Name:predicted gene, 34917
Gene Alias:
Gene Type:
CpG%:0.090909
GC%:0.739130
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.