rfmm_15395.1

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Basic information about the TSS


TSS ID:rfmm_15395.1
Species:mouse
Chr:chr2
Start:66086921
End:66086989
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1696401,EM10E0697612)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000102718.10:0
ENSMUST00000125446.3:0
DQ011164:0
BC151199:0
BC172115:0
GeneID:73668
HGNC/MGI_ID:MGI:1920918
UniProt_ID:E9PVK4 Q0HA38
Nearer transcript ids and distances:
    Gene_name:tetratricopeptide repeat domain 21B
    Gene_symbol:Ttc21b
    Gene_synonyms:2410066K11Rik Thm1 aln line_158
    Gene_source:MGI:1920918



    TATA-Box annotation


    Distance to TSS:6
    Nearest PromoterID:NM_001290669.1
    Entrez ID:Ttc21b
    Nearest Unigene:NM_001047604
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:tetratricopeptide repeat domain 21B
    Gene Alias:
    Gene Type:
    CpG%:0.073529
    GC%:0.681159
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.