rfmm_15592.1

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Basic information about the TSS


TSS ID:rfmm_15592.1
Species:mouse
Chr:chr2
Start:69416366
End:69416381
Strand:-
Source datasetsDRA000914|PRJDB10397|GSE117655
ProtocolCAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2642486,EM10E1090184)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000100051.9:0
ENSMUST00000092551.5:0
AK084165:0
AK165434:0
AK049346:0
GeneID:14725
HGNC/MGI_ID:MGI:95794
UniProt_ID:A2ARV5 Q3V346
Nearer transcript ids and distances:
  • ENSMUST00000080953.12:-28
Gene_name:low density lipoprotein receptor-related protein 2
Gene_symbol:Lrp2
Gene_synonyms:D230004K18Rik Gp330 Megalin b2b1625.2Clo
Gene_source:MGI:95794



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_001081088.2
Entrez ID:Lrp2
Nearest Unigene:NM_001081088
Nearest Refseq:
Nearest Ensembl:
Gene Name:low density lipoprotein receptor-related protein 2
Gene Alias:
Gene Type:
CpG%:0.133333
GC%:0.687500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.