rfmm_157243.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_157243.1
TSS ID(Version3):mm_147149.1
Species:mouse
Chr:chr18
Start:36803075
End:36803370
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2584009,EM10E1065486)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000173482.8:0
ENSMUST00000236330.2:0
ENSMUST00000006209.5:0
ENSMUST00000174125.2:0
AF092039:0
AK007302:0
AK154232:0
BC048362:0
AK010375:0
AK136702:0
GeneID:24068
HGNC/MGI_ID:MGI:1344414
UniProt_ID:A0A494BBA2 G3UZQ4 G3X8R2
Nearer transcript ids and distances:
  • LF201379:-1
  • MA436956:-1
  • ENSMUST00000173202.3:-291
  • ENSMUST00000173875.9:-498
view more...
Gene_name:steroid receptor RNA activator 1
Gene_symbol:Sra1
Gene_synonyms:Srap
Gene_source:MGI:1344414



TATA-Box annotation


Distance to TSS:142
Nearest PromoterID:NM_025291.3
Entrez ID:Sra1
Nearest Unigene:NM_001164406
Nearest Refseq:
Nearest Ensembl:
Gene Name:steroid receptor RNA activator 1
Gene Alias:
Gene Type:
CpG%:0.088136
GC%:0.645270
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.