rfmm_157315.1

Basic information about the TSS

TSS ID:	rfmm_157315.1
Species:	mouse
Chr:	chr18

Start:	37072174
End:	37072181
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2584092,EM10E1065529)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000115662.9:77 BC030897:77
GeneID:	353234
HGNC/MGI_ID:	MGI:2681880
UniProt_ID:	Q05C01 Q91Y17
Nearer transcript ids and distances:	ENSMUST00000195590.2:96 BC141390:96 BC156386:190 BC172669:190 AY013760:190 view more...

Gene_name:	protocadherin alpha 2
Gene_symbol:	Pcdha2
Gene_synonyms:
Gene_source:	MGI:2681880

TATA-Box annotation

Distance to TSS:	-81
Nearest PromoterID:	NM_198117.2
Entrez ID:	Pcdha2
Nearest Unigene:	NM_198117
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin alpha 2
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.375000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.