rfmm_157316.1

Basic information about the TSS

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TSS ID: rfmm_157316.1 Species: mouse Chr: chr18		Start: 37072232 End: 37072265 Strand: +
Source datasets	FANTOM5|EPD
Protocol	CAGE|TSS_database
TSS cluster detected*	2

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2584092,EM10E1065529)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000115662.9:0 BC030897:0 GeneID: 353234 HGNC/MGI_ID: MGI:2681880 UniProt_ID: Q05C01 Q91Y17 Nearer transcript ids and distances: ENSMUST00000195590.2:12 BC141390:12 BC156386:106 BC172669:106 AY013760:106 view more...

Gene_name: protocadherin alpha 2 Gene_symbol: Pcdha2 Gene_synonyms: Gene_source: MGI:2681880

TATA-Box annotation

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Distance to TSS:	-10
Nearest PromoterID:	NM_198117.2
Entrez ID:	Pcdha2
Nearest Unigene:	NM_198117
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin alpha 2
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.352941
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.