rfmm_157319.1

Basic information about the TSS

TSS ID:	rfmm_157319.1
Species:	mouse
Chr:	chr18

Start:	37085675
End:	37085713
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2584100,EM10E1065532)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000192512.6:0 ENSMUST00000194235.2:0 AK149282:0 AK048980:0
GeneID:	12936
HGNC/MGI_ID:	MGI:1298406
UniProt_ID:	O88689
Nearer transcript ids and distances:	ENSMUST00000192295.2:15 BC060211:15 NM_007766.2:29 D86916:29 ENSMUST00000115661.5:81 AF464180:81 AY013762:106 view more...

Gene_name:	protocadherin alpha 4
Gene_symbol:	Pcdha4
Gene_synonyms:	Cnr1 Crnr1
Gene_source:	MGI:1298406

TATA-Box annotation

Distance to TSS:	-7
Nearest PromoterID:	NM_001174154.2
Entrez ID:	Gm37013
Nearest Unigene:	NM_001174154
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin alpha 4
Gene Alias:
Gene Type:
CpG%:	0.026316
GC%:	0.435897
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.