rfmm_157346.1

Basic information about the TSS

TSS ID:	rfmm_157346.1
Species:	mouse
Chr:	chr18

Start:	37554482
End:	37554508
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	CTCF-only,CTCF-bound (EM10D2584200,EM10E1065568)
Category:	CTCF-only

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK160803:0
GeneID:	93882
HGNC/MGI_ID:	MGI:2136746
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000053073.6:-11 NM_053136.3:-11 AK078189:-11 BC160342:160 AY013772:164 view more...

Gene_name:	protocadherin beta 11
Gene_symbol:	Pcdhb11
Gene_synonyms:	Pcdhb5E PcdhbK
Gene_source:	MGI:2136746

TATA-Box annotation

Distance to TSS:	24
Nearest PromoterID:	NM_053136.3
Entrez ID:	Pcdhb11
Nearest Unigene:	NM_053136
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin beta 11
Gene Alias:
Gene Type:
CpG%:	0.038462
GC%:	0.407407
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.