rfmm_157397.1

Basic information about the TSS

TSS ID:	rfmm_157397.1
Species:	mouse
Chr:	chr18

Start:	37899012
End:	37899061
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	DNase-H3K4me3,CTCF-bound (EM10D2584310,EM10E1065623)
Category:	DNase-H3K4me3

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	BC054528:0
GeneID:	93724
HGNC/MGI_ID:	MGI:1935229
UniProt_ID:
Nearer transcript ids and distances:	U88550:13 AY013795:109 ENSMUST00000193045.2:-186 BC066851:-186 LF254803:334 MA490380:334 ENSMUST00000044851.8:-379 NM_033595.4:-379 BC056998:-379 LF254804:393 MA490381:393 view more...

Gene_name:	protocadherin gamma subfamily A, 12
Gene_symbol:	Pcdhga12
Gene_synonyms:	Pcdh13 pc2c
Gene_source:	MGI:1935229

TATA-Box annotation

Distance to TSS:	403
Nearest PromoterID:	NM_033595.4
Entrez ID:	Pcdhga12
Nearest Unigene:	NM_033595
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin gamma subfamily A, 12
Gene Alias:
Gene Type:
CpG%:	0.020408
GC%:	0.440000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.