rfmm_157398.1

Basic information about the TSS

TSS ID:	rfmm_157398.1
TSS ID(Version3):	mm_144943.1 mm_144942.1
Species:	mouse
Chr:	chr18

Start:	37901392
End:	37901447
Strand:	+

Source datasets

FANTOM5|PRJDB10397|DRA000914

Protocol

CAGE|C1CAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2584313,EM10E1065626)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AF464158:104 AF464156:104
GeneID:	93724
HGNC/MGI_ID:	MGI:1935229
UniProt_ID:	Q8K4A4 Q8K4A6
Nearer transcript ids and distances:

Gene_name:	protocadherin gamma subfamily A, 12
Gene_symbol:	Pcdhga12
Gene_synonyms:	Pcdh13 pc2c
Gene_source:	MGI:1935229

TATA-Box annotation

Distance to TSS:	2786
Nearest PromoterID:	NM_033595.4
Entrez ID:	Pcdhga12
Nearest Unigene:	NM_033595
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protocadherin gamma subfamily A, 12
Gene Alias:
Gene Type:
CpG%:	0.090909
GC%:	0.553571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.