rfmm_15793.1

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Basic information about the TSS


TSS ID:rfmm_15793.1
Species:mouse
Chr:chr2
Start:71348197
End:71348197
Strand:+
Source datasetsDRA000914
ProtocolCAGE_and_CAGEscan
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS (EM10D1699100,EM10E0698619)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK037504:43
GeneID:320441
HGNC/MGI_ID:MGI:2444035
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA A130022F02 gene
    Gene_symbol:A130022F02Rik
    Gene_synonyms:
    Gene_source:MGI:2444035



    TATA-Box annotation


    Distance to TSS:-2152
    Nearest PromoterID:XR_004941111.1
    Entrez ID:LOC118568569
    Nearest Unigene:XR_004941111
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA A130022F02 gene
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:1.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.