rfmm_158657.1

Basic information about the TSS

TSS ID:	rfmm_158657.1
TSS ID(Version3):	mm_147722.1 mm_147723.1
Species:	mouse
Chr:	chr18

Start:	60981935
End:	60982048
Strand:	-

Source datasets

FANTOM5|DRA000914|PRJDB10397|GSE117655

Protocol

CAGE|CAGE_and_CAGEscan|C1CAGE|deepCAGE

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D1615204,EM10E0662433)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000175934.8:0 ENSMUST00000176630.8:0 ENSMUST00000163446.9:0 ENSMUST00000177172.8:0 U81030:0 BC057342:0 AF001794:0 BC060105:0 BC052669:0 AK089518:0 BC046608:0
GeneID:	21453
HGNC/MGI_ID:	MGI:892003
UniProt_ID:	F6R3V4 H3BIX0 H3BL37 O08784 Q05BH6 Q6PFZ6 Q7TPZ2
Nearer transcript ids and distances:	LF255349:67 MA490926:67 AK137809:125 ENSMUST00000177343.2:417 view more...

Gene_name:	treacle ribosome biogenesis factor 1
Gene_symbol:	Tcof1
Gene_synonyms:	treacle
Gene_source:	MGI:892003

TATA-Box annotation

Distance to TSS:	45
Nearest PromoterID:	NM_011552.3
Entrez ID:	Tcof1
Nearest Unigene:	XR_001782353
Nearest Refseq:
Nearest Ensembl:
Gene Name:	treacle ribosome biogenesis factor 1
Gene Alias:
Gene Type:
CpG%:	0.123894
GC%:	0.710526
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.