rfmm_159782.1

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Basic information about the TSS


TSS ID:rfmm_159782.1
TSS ID(Version3):mm_146219.1
mm_146217.1
mm_146218.1
Species:mouse
Chr:chr18
Start:77126072
End:77126293
Strand:+
Source datasetsFANTOM5|DRA000914|PRJDB10397
ProtocolCAGE|CAGE_and_CAGEscan|C1CAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS (EM10D2596828,EM10E1070764)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK145497:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:8810
    Nearest PromoterID:NM_027721.2
    Entrez ID:Katnal2
    Nearest Unigene:XM_036161277
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.013575
    GC%:0.427928
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):