rfmm_160566.1

Basic information about the TSS

TSS ID:	rfmm_160566.1
Species:	mouse
Chr:	chr19

Start:	4241035
End:	4241068
Strand:	-

Source datasets

PRJDB10397|DRA000914|GSE117655

Protocol

C1CAGE|CAGE_and_CAGEscan|deepCAGE

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D1632030,EM10E0669433)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000235329.2:0 ENSMUST00000237495.2:0 AK040487:0 AK146426:0 AK153836:0
GeneID:	108995
HGNC/MGI_ID:	MGI:1922072 MGI:6303033
UniProt_ID:	Q8C9V1
Nearer transcript ids and distances:	AK075803:2 ENSMUST00000045864.4:8 AK131177:8 ENSMUST00000236780.2:108 AK088119:108 ENSMUST00000235782.2:199 ENSMUST00000236719.2:199 BC094901:199 AK154444:199 ENSMUST00000235487.2:203 ENSMUST00000235450.2:-215 ENSMUST00000236890.2:-215 BC160248:227 view more...

Gene_name:	TBC1 domain family, member 10c; predicted gene, 50230
Gene_symbol:	Gm50230 Tbc1d10c
Gene_synonyms:	1810062O14Rik Carabin
Gene_source:	MGI:1922072 MGI:6303033

TATA-Box annotation

Distance to TSS:	-5
Nearest PromoterID:	NM_178650.3
Entrez ID:	Tbc1d10c
Nearest Unigene:	NM_178650
Nearest Refseq:
Nearest Ensembl:
Gene Name:	TBC1 domain family, member 10c; predicted gene, 50230
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.529412
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.