rfmm_160567.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS (EM10D1632030,EM10E0669433) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NM_178650.3 |
| Entrez ID: | Tbc1d10c |
| Nearest Unigene: | NM_178650 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | TBC1 domain family, member 10c; predicted gene, 50230 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.714286 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK153836:34 AK146426:38 AK075803:43 ENSMUST00000045864.4:49 AK131177:49 ENSMUST00000236780.2:149 AK088119:149 ENSMUST00000235450.2:-201 ENSMUST00000236890.2:-201 ENSMUST00000235782.2:240 ENSMUST00000236719.2:240 BC094901:240 AK154444:240 ENSMUST00000235487.2:244 BC160248:268" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.